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Respiratory Virus Report, Week 41 ending October 13, 2018 - Canada.ca

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Respiratory Virus Report, Week 41 ending October 13, 2018
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Organization:
Public Health Agency of Canada
On this page
List of abbreviations
Respiratory Virus Detections and Isolations
Number of positive laboratory tests for other respiratory viruses
Positive Influenza tests
Positive Respiratory synctial virus tests
Positive Parainfluenza tests
Positive Adenovirus tests
Positive Human metapneumovirus tests
Positive Enterovirus/Rhinovirus tests
Positive Coronovirus tests
List of abbreviations
A(H1N1)pdm09
Influenza A(H1N1)pdm09
A(H3)
Influenza A(H3N2)
A (UnS)
Influenza A (Unsubtyped)
Adeno
Adenovirus
CHEO
Children's Hospital of Eastern Ontario
Coron
Coronavirus
Entero
Enterovirus
hMPV
human metapneumovirus
HSC
Health Sciences Centre
N.A
Not Applicable
P.H.L.
Public Health Laboratory
P.H.O.L.
Public Health Ontario Laboratory
PIV
Parainfluenza
Rhino
Rhinovirus
RSV
Respiratory syncytial virus
UHN
University Health Network
Respiratory Virus Detections and Isolations
Table 1: Respiratory Virus Detections/Isolations for the week ending October 13, 2018 (Reporting Week 201841)
Table 1: Respiratory Virus Detections/Isolations for the week ending October 13, 2018 (Reporting Week 201841)
Reporting Laboratory
Flu Tested
A(H1N1)pdm09 Positive
A(H3) Positive
A(UnS) Positive
Total Flu A Positive
Total Flu B Positive
RSV Tested
RSV Positive
PIV Tested
PIV 1 Positive
PIV 2 Positive
PIV 3 Positive
PIV 4 Positive
Other PIV Positive
Adeno Tested
Adeno Positive
hMPV Tested
hMPV Positive
Entero/Rhino Tested
Entero/Rhino Positive
Coron Tested
Coron Positive
Newfoundland
38
0
0
1
1
0
38
0
38
0
0
1
0
0
38
0
38
0
38
11
N.A.
N.A.
Prince Edward Island
13
0
0
0
0
0
13
0
1
0
0
0
0
0
1
0
1
0
1
0
1
0
Nova Scotia
22
0
0
0
0
0
22
0
15
0
0
0
0
0
15
0
15
1
15
5
15
0
New Brunswick
107
0
0
1
1
0
107
1
63
0
0
0
0
0
63
4
63
0
63
28
63
0
Atlantic
180
0
0
2
2
0
180
1
117
0
0
1
0
0
117
4
117
1
117
44
79
0
Région Nord-Est
55
0
0
4
4
0
50
0
0
0
0
0
0
0
0
0
0
0
N.A.
N.A.
0
0
Québec-Chaudière-Appalaches
63
0
0
0
0
0
75
0
90
0
3
0
1
0
89
5
82
0
N.A.
N.A.
82
0
Centre-du-Québec
41
0
0
0
0
2
38
0
0
0
0
0
0
0
0
0
0
0
N.A.
N.A.
0
0
Montréal-Laval
586
0
0
3
3
0
596
7
427
2
5
0
2
0
427
15
417
1
N.A.
N.A.
418
3
Ouest du Québec
57
0
0
0
0
0
46
0
0
0
0
0
0
0
0
0
0
0
N.A.
N.A.
0
0
Montérégie
63
0
0
0
0
0
57
0
0
0
0
0
0
0
0
0
0
0
N.A.
N.A.
0
0
Province of Québec
865
0
0
7
7
2
862
7
517
2
8
0
3
0
516
20
499
1
N.A.
N.A.
500
3
Ottawa P.H.L.
9
0
0
1
1
0
7
0
7
0
0
0
0
0
7
0
7
0
0
0
0
0
CHEO - Ottawa
127
0
0
4
4
0
127
1
18
0
0
0
0
0
18
0
18
0
18
6
18
1
Kingston P.H.L.
21
0
0
0
0
0
15
0
15
0
0
0
0
0
15
0
15
0
0
0
0
0
UHN / Mount Sinai Hospital
209
0
0
0
0
0
209
0
9
0
0
0
0
0
0
0
9
0
N.A.
N.A.
N.A.
N.A.
P.H.O.L. - Toronto
258
0
1
0
1
0
257
6
257
1
1
1
0
0
257
2
253
2
4
0
0
0
Sick Kids Hospital - Toronto
44
0
0
0
0
0
44
2
44
0
2
1
0
0
44
2
44
1
44
18
44
0
Sunnybrook & Women's College HSC
64
0
0
0
0
0
64
0
64
0
0
1
0
0
64
0
64
2
64
11
64
1
Sault Ste. Marie P.H.L.
2
0
0
0
0
0
2
0
2
0
0
0
0
0
2
0
2
0
0
0
0
0
Timmins P.H.L.
1
0
0
0
0
0
1
0
1
0
0
0
0
0
1
0
0
0
1
0
0
0
St. Joseph's - London
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
London P.H.L.
50
0
0
0
0
0
50
1
50
0
1
0
0
0
50
0
49
0
1
0
0
0
Orillia P.H.L.
16
0
0
0
0
0
11
0
11
0
0
0
0
0
11
0
11
0
0
0
0
0
Thunder Bay P.H.L.
6
0
0
0
0
0
6
0
6
0
0
1
0
0
6
0
6
0
0
0
0
0
Sudbury P.H.L.
7
0
0
0
0
0
6
0
6
0
0
0
0
0
6
0
6
0
0
0
0
0
Hamilton P.H.L.
55
0
0
0
0
0
48
0
48
0
0
0
0
0
48
0
47
0
1
0
0
0
Peterborough P.H.L.
39
0
0
0
0
0
36
0
36
0
0
0
0
0
36
0
35
0
1
0
0
0
Province of Ontario
908
0
1
5
6
0
883
10
574
1
4
4
0
0
565
4
566
5
134
35
126
2
Manitoba
264
3
0
0
3
0
261
1
173
0
0
2
1
0
173
0
71
0
173
33
71
0
Regina
203
1
1
0
2
0
203
1
203
0
1
1
0
0
203
3
203
0
203
84
203
0
Saskatoon
113
0
0
4
4
0
113
0
113
0
0
0
0
0
113
4
113
0
113
15
113
0
Province of Saskatchewan
316
1
1
4
6
0
316
1
316
0
1
1
0
0
316
7
316
0
316
99
316
0
Province of Alberta
552
17
1
7
25
1
486
0
486
2
3
4
2
0
486
6
486
3
486
140
486
2
Prairies
1132
21
2
11
34
1
1063
2
975
2
4
7
3
0
975
13
873
3
975
272
873
2
British Columbia
352
0
2
2
4
0
352
3
253
0
3
2
4
0
253
4
253
0
202
81
202
1
Yukon
11
0
0
0
0
0
11
0
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
Northwest Territories
13
0
0
0
0
0
13
0
13
0
0
0
0
0
13
1
13
0
13
1
13
0
Nunavut
2
0
0
0
0
0
2
0
2
0
0
0
0
0
2
0
2
0
2
2
2
0
Territories
26
0
0
0
0
0
26
0
15
0
0
0
0
0
15
1
15
0
15
3
15
0
CANADA
3463
21
5
27
53
3
3366
23
2451
5
19
14
10
0
2441
46
2323
10
1443
435
1795
8
Specimens from Yukon (YT), Northwest Territories (NT) and Nunavut (NU) are sent to reference laboratories in other provinces and reported results reflect specimens identified as originating from YT, NT or NU.
Delays in the reporting of data may cause data to change retrospectively.
Table 2: Respiratory Virus Detections/Isolations for the period August 26, 2018 - October 13, 2018 (Reporting Weeks 201835-201841)
Table 2: Respiratory Virus Detections/Isolations for the period August 26, 2018 - October 13, 2018 (Reporting Weeks 201835-201841)
Reporting Laboratory
Flu Tested
A(H1N1)pdm09 Positive
A(H3) Positive
A(UnS) Positive
Total Flu A Positive
Total Flu B Positive
RSV Tested
RSV Positive
PIV Tested
PIV 1 Positive
PIV 2 Positive
PIV 3 Positive
PIV 4 Positive
Other PIV Positive
Adeno Tested
Adeno Positive
hMPV Tested
hMPV Positive
Entero/Rhino Tested
Entero/Rhino Positive
Coron Tested
Coron Positive
Newfoundland
224
0
0
1
1
0
224
0
224
0
0
4
0
0
224
4
224
0
224
66
N.A.
N.A.
Prince Edward Island
39
0
0
0
0
0
36
0
21
0
0
1
0
0
16
2
16
0
16
7
16
0
Nova Scotia
106
0
0
0
0
0
107
0
62
0
0
1
0
0
62
0
62
1
62
16
62
0
New Brunswick
495
0
0
2
2
0
495
4
245
0
0
1
0
0
245
13
245
0
245
69
245
1
Atlantic
864
0
0
3
3
0
862
4
552
0
0
7
0
0
547
19
547
1
547
158
323
1
Région Nord-Est
217
0
0
7
7
0
200
0
0
0
0
0
0
0
0
0
0
0
N.A.
N.A.
0
0
Québec-Chaudière-Appalaches
316
0
0
0
0
0
416
2
436
1
12
1
2
0
442
7
404
1
N.A.
N.A.
404
0
Centre-du-Québec
208
0
0
0
0
2
208
1
0
0
0
0
0
0
0
0
0
0
N.A.
N.A.
0
0
Montréal-Laval
3341
0
0
6
6
0
3463
38
2770
9
46
16
14
0
2770
72
2683
8
N.A.
N.A.
2684
10
Ouest du Québec
295
0
0
0
0
0
247
1
0
0
0
0
0
0
0
0
0
0
N.A.
N.A.
0
0
Montérégie
294
0
0
0
0
0
281
2
0
0
0
0
0
0
0
0
0
0
N.A.
N.A.
0
0
Province of Québec
4671
0
0
13
13
2
4815
44
3206
10
58
17
16
0
3212
79
3087
9
N.A.
N.A.
3088
10
Ottawa P.H.L.
69
0
0
1
1
0
66
0
66
0
0
0
0
0
66
0
63
0
4
0
0
0
CHEO - Ottawa
654
0
0
5
5
0
654
6
144
0
1
2
0
0
144
10
144
0
144
59
144
1
Kingston P.H.L.
89
0
0
0
0
0
83
0
83
0
0
0
0
0
83
0
82
0
10
0
0
0
UHN / Mount Sinai Hospital
1247
0
0
2
2
0
1247
9
84
0
0
0
0
0
0
0
84
0
N.A.
N.A.
N.A.
N.A.
P.H.O.L. - Toronto
1314
9
6
0
15
3
1293
11
1293
4
9
5
0
0
1293
6
1248
3
76
0
0
0
Sick Kids Hospital - Toronto
306
0
0
0
0
0
306
4
306
1
6
5
3
0
306
9
306
2
306
135
306
2
Sunnybrook & Women's College HSC
251
0
0
0
0
0
251
0
251
0
0
2
0
0
251
0
251
2
251
44
251
7
Sault Ste. Marie P.H.L.
25
0
0
0
0
0
25
0
25
0
0
0
0
0
25
0
24
0
1
0
0
0
Timmins P.H.L.
16
0
0
0
0
0
16
0
16
0
0
0
0
0
16
0
12
0
7
0
0
0
St. Joseph's - London
131
0
0
0
0
0
131
0
131
0
1
3
0
0
131
2
131
1
131
59
131
0
London P.H.L.
263
0
0
0
0
0
258
3
258
0
2
0
0
0
258
1
248
0
16
0
0
0
Orillia P.H.L.
73
0
0
0
0
0
68
0
68
0
0
0
0
0
68
0
66
0
2
0
0
0
Thunder Bay P.H.L.
26
0
0
0
0
0
26
0
26
0
0
1
0
0
26
0
24
0
2
0
0
0
Sudbury P.H.L.
67
0
0
0
0
0
66
1
66
0
0
0
0
0
66
0
55
0
11
0
0
0
Hamilton P.H.L.
286
0
0
0
0
0
275
5
275
0
1
0
0
0
275
3
271
0
9
0
0
0
Peterborough P.H.L.
146
0
0
0
0
0
143
2
143
0
0
0
0
0
143
0
142
0
3
0
0
0
Province of Ontario
4963
9
6
8
23
3
4908
41
3235
5
20
18
3
0
3151
31
3151
8
973
297
832
10
Manitoba
1099
5
0
0
5
0
1083
2
797
0
0
5
2
0
797
6
300
0
797
147
334
0
Regina
953
12
3
1
16
0
953
2
953
0
7
8
4
0
953
15
953
0
953
382
953
0
Saskatoon
549
0
0
14
14
0
549
3
549
1
0
1
0
0
549
19
549
0
549
145
549
1
Province of Saskatchewan
1502
12
3
15
30
0
1502
5
1502
1
7
9
4
0
1502
34
1502
0
1502
527
1502
1
Province of Alberta
3277
35
12
18
65
7
2926
0
2926
4
22
24
17
0
2926
46
2926
18
2926
1031
2926
8
Prairies
5878
52
15
33
100
7
5511
7
5225
5
29
38
23
0
5225
86
4728
18
5225
1705
4762
9
British Columbia
1814
6
10
14
30
1
1814
9
1317
2
6
25
16
0
1317
19
1317
3
1098
379
1098
6
Yukon
32
0
0
0
0
0
32
0
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
N.A.
Northwest Territories
55
0
0
0
0
0
55
0
55
0
0
2
0
0
55
5
55
0
55
16
55
1
Nunavut
12
0
0
0
0
0
12
0
12
0
0
0
0
0
12
2
11
0
12
7
11
0
Territories
99
0
0
0
0
0
99
0
67
0
0
2
0
0
67
7
66
0
67
23
66
1
CANADA
18289
67
31
71
169
13
18009
105
13602
22
113
107
58
0
13519
241
12896
39
7910
2562
10169
37
Specimens from YT, NT and NU are sent to reference laboratories in other provinces and reported results reflect specimens identified as originating from YT, NT or NU.
Delays in the reporting of data may cause data to change retrospectively.
Due to reporting delays, the sum of weekly report totals do not add up to cumulative totals.
Number of positive laboratory tests for other respiratory viruses
Figure 1: Number positive laboratory tests for other respiratory viruses by report week, Canada, 2018-19
Figure 1: Number positive laboratory tests for other respiratory viruses by report week, Canada, 2018-19 - Text description
Number positive laboratory tests for other respiratory viruses by report week, Canada, 2018-19
Week
ParaInfluenza
Adenovirus
Human metapneumovirus
Enterovirus/Rhinovirus
Coronavirus
Respiratory syncytial virus
38
41
31
2
440
3
15
39
40
42
6
487
9
12
40
47
42
7
490
9
24
41
48
46
10
436
8
23
Positive Influenza tests
Figure 2: Positive Influenza Tests (%) in Canada by Region by Week of Report
Figure 2: Positive Influenza Tests (%) in Canada by Region by Week of Report - Text description
Positive Influenza Tests (%) in Canada by Region by Week of Report
Week
Week end
Can Tests
Can A
%
Can B
%
Atl Tests
Atl A
%
Atl B
%
QC Tests
QC A
%
QC B
%
ON Tests
ON A
%
ON B
%
Pr Tests
Pr A
%
Pr B
%
BC Tests
BC A
%
BC B
%
Terr Tests
Terr A
%
Terr B
%
38
2018-09-22
2567
0.43
0.12
98
0.00
0.00
669
0.15
0.00
722
0.14
0.42
799
0.38
0.00
262
2.29
0.00
17
0
0
39
2018-09-29
2996
0,57
0,10
145
0,69
0,00
753
0,00
0,00
842
0,00
0,00
954
0,84
0,21
289
2,77
0,35
13
0
0
40
2018-10-06
3384
1,54
0,09
153
0,00
0,00
833
0,36
0,00
902
0,11
0,00
1130
3,63
0,27
359
1,95
0,00
7
0
0
41
2018-10-13
3463
1,56
0,09
180
1,11
0,00
865
0,81
0,23
908
0,66
0,00
1132
3,00
0,09
352
1,42
0,00
26
0
0
Positive Respiratory synctial virus tests
Figure 3: Positive Respiratory syncytial virus (RSV) Tests (%) in Canada by Region by Week of Report
Figure 3: Positive Respiratory syncytial virus (RSV) Tests (%) in Canada by Region by Week of Report - Text description
Positive Respiratory syncytial virus (RSV) Tests (%) in Canada by Region by Week of Report
Week
Week end
Can Tests
RSV
%
Atl Tests
RSV
%
QC Tests
RSV
%
ON Tests
RSV
%
Pr Tests
RSV
%
BC Tests
RSV
%
Terr Tests
RSV
%
38
2018-09-22
2562
0.59
99
2.02
720
0.56
720
1.11
744
0
262
0.38
17
0
39
2018-09-29
2946
0,41
146
0
770
0,78
838
0,36
890
0,22
289
0,35
13
0
40
2018-10-06
3307
0,73
153
0,65
844
1,42
897
0,56
1047
0,29
359
0,84
7
0
41
2018-10-13
3366
0,68
180
0,56
862
0,81
883
1,13
1063
0,19
352
0,85
26
0
Positive Parainfluenza tests
Figure 4: Positive Parainfluenza (PIV) Tests (%) in Canada by Region by Week of Report
Figure 4: Positive Parainfluenza (PIV) Tests (%) in Canada by Region by Week of Report - Text description
Positive Parainfluenza (PIV) Tests (%) in Canada by Region by Week of Report
Week
Week End
Canada Tests
PIV
%
Atl Tests
PIV
%
QC Tests
PIV
%
ON Tests
PIV
%
Pr Tests
PIV
%
BC Tests
PIV
%
38
2018-09-22
1924
2.13
70
1.43
487
2.67
453
1.1
716
1.96
181
3.31
39
2018-09-29
2214
1,81
113
1,77
492
4,07
555
0,72
847
0,83
194
3,61
40
2018-10-06
2444
1,92
82
1,22
492
3,05
635
1,26
987
1,72
241
2,07
41
2018-10-13
2462
1,95
117
0,85
517
2,51
574
1,57
975
1,64
253
3,56
Positive Adenovirus tests
Figure 5: Positive Adenovirus (adeno) Tests (%) in Canada by Region by Week of Report
Figure 5: Positive Adenovirus (adeno) Tests (%) in Canada by Region by Week of Report - Text description
Positive Adenovirus (adeno) Tests (%) in Canada by Region by Week of Report
Week
Week End
Can Tests
Adeno
%
Atl Tests
Adeno
%
QC Tests
Adeno
%
ON Tests
Adeno
%
Pr Tests
Adeno
%
BC Tests
Adeno
%
38
2018-09-22
1910
1.62
65
7.69
489
1.02
442
1.36
716
1.54
181
2.21
39
2018-09-29
2200
1,91
113
0,88
493
3,04
540
0,93
847
2,13
194
1,55
40
2018-10-06
2426
1,73
82
2,44
492
3,05
617
1,3
987
1,62
241
0
41
2018-10-13
2452
1,88
117
3,42
516
3,88
565
0,71
975
1,33
253
1,19
Positive Human metapneumovirus tests
Figure 6: Positive human metapneumovirus (hMPV) Tests (%) in Canada by Region by Week of Report
Figure 6: Positive human metapneumovirus (hMPV) Tests (%) in Canada by Region by Week of Report - Text description
Positive human metapneumovirus (hMPV) Tests (%) in Canada by Region by Week of Report
Week
Week End
Can Tests
hMPV
%
Atl Tests
hMPV
%
QC Tests
hMPV
%
ON Tests
hMPV
%
Pr Tests
hMPV
%
BC Tests
hMPV
%
38
2018-09-22
1837
0.11
65
0.00
470
0.21
434
0
670
0
181
0.55
39
2018-09-29
2097
0,29
113
0,00
474
0
538
0
765
0,65
194
0,52
40
2018-10-06
2312
0,3
82
0,00
467
0,43
620
0,16
895
0,45
241
0
41
2018-10-13
2334
0,43
117
0,85
499
0,2
566
0,88
873
0,34
253
0
Positive Enterovirus/Rhinovirus tests
Figure 7: Positive Enterovirus/Rhinovirus (entero/rhino) Tests (%) in Canada by Region by Week of Report
Figure 7: Positive Enterovirus/Rhinovirus (entero/rhino) Tests (%) in Canada by Region by Week of Report - Text description
Positive Enterovirus/Rhinovirus (entero/rhino) Tests (%) in Canada by Region by Week of Report
Week
Week End
Canada Tests
Entero/rhino
%
Atl Tests
Entero/rhino
%
QC Tests
Entero/rhino
%
ON Tests
Entero/rhino
%
Pr Tests
Entero/rhino
%
BC Tests
Entero/rhino
%
38
2018-09-22
1112
39.57
65
24.62
N.A.
N.A.
161
34.78
716
41.48
153
41.83
39
2018-09-29
1303
37,38
113
32,74
N.A.
N.A.
180
36,11
847
38,37
150
38,67
40
2018-10-06
1470
33,33
82
32,93
N.A.
N.A.
193
37,31
987
30,9
201
42,29
41
2018-10-13
1454
29,99
117
37,61
N.A.
N.A.
134
26,12
975
27,9
202
39,11
Positive Coronovirus tests
Figure 8: Positive Coronavirus (coron) Tests (%) in Canada by Region by Week of Report
Figure 8: Positive Coronavirus (coron) Tests (%) in Canada by Region by Week of Report - Text description
Positive Coronavirus (coron) Tests (%) in Canada by Region by Week of Report
Week
Week End
Canada Tests
Coron
%
Atl Tests
Coron
%
QC Tests
Coron
%
ON Tests
Coron
%
Pr Tests
Coron
%
BC Tests
Coron
%
38
2018-09-22
1477
0.2
37
0
470
0
130
0.77
670
0.3
153
0
39
2018-09-29
1616
0,56
60
0
474
0
154
2,6
765
0,13
150
2,67
40
2018-10-06
1786
0,5
46
0
467
1,07
170
1,76
895
0
201
0,5
41
2018-10-13
1806
0,44
79
0
500
0,6
126
1,59
873
0,23
202
0,5
Page details
Date modified:
2018-10-18